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OWLAPI Imported Closure Reasoner
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Live OWL Documentation Environment (LODE) is a service that automatically extracts classes, object properties, data properties, named individuals, annotation properties, general axioms and namespace declarations from an OWL and OWL2 ontology, and renders them as ordered lists, together with their textual definitions, in a human-readable HTML page designed for browsing and navigation by means of embedded links.

This LODE service is an open source development, and can be freely used, as described in this document. It may be used in conjunction with content negotiation to display this human-readable version of an OWL ontology when the user accesses the ontology using a web browser, or alternatively to deliver the OWL ontology itself when the user accesses the ontology using an ontology editing tool such as Protégé and NeOn Toolkit. An exemplar implementation of such content negotiation is given in the Best Practice Recipes for Publishing RDF Vocabularies by using the .htaccess file:

AddType application/rdf+xml .rdf

# Rewrite engine setup
RewriteEngine On
			
# Rewrite rule to serve HTML content
RewriteCond %{HTTP_ACCEPT} !application/rdf\+xml.*(text/html|application/xhtml\+xml)
RewriteCond %{HTTP_ACCEPT} text/html [OR]
RewriteCond %{HTTP_ACCEPT} application/xhtml\+xml [OR]
RewriteCond %{HTTP_USER_AGENT} ^Mozilla/.*
RewriteRule ^ontology\$ https://w3id.org/lode/http://www.mydomain.com/ontology [R=303,L]

# Rewrite rule to serve RDF/XML content if requested
RewriteCond %{HTTP_ACCEPT} application/rdf\+xml
RewriteRule ^ontology\$ ontology.owl [R=303]

# Choose the default response
RewriteRule ^ontology\$ ontology.owl [R=303]
		

Depending on the parameters specified, the HTML page created by LODE takes into account both ontological axioms and annotations. The CSSs used for the resulting HTML page are based on the W3C CSSs for Recommendation documents.

The following pseudo-URL describes the way to call the LODE service:

https://w3id.org/lode/optional-parameters/ontology-url

where:

w3id.org/lode

is the URL to call the service.

ontology-url

is the full http://... URL of the OWL ontology that will be processed by the service. It must be always the last item in the pseudo-URL, and may be preceded by one or more (slash-separated) parameters.

optional slash-separated parameters:

owlapi

When this optional parameter is specified, the ontology specified in ontology-url will be pre-processed via OWLAPI, in order to linearized it in standard RDF/XML format. This parameter is always strongly recommended.

closure

When this optional parameter is specified, the transitive closure given by considering the imported ontologies of ontology-url is added to the HTML description of the ontology. This parameter implicitly specifies the owlapi parameter. If both functions closure and imported are specified (in any order), just imported will be considered.

imported

When this optional parameter is specified, the axioms contained the ontologies directed imported into ontology-url are added to the HTML description of the ontology. This parameter implicitly specifies the owlapi parameter. If both parameters closure and imported are specified (in any order), just imported will be considered.

reasoner

When this optional parameter is specified, the assertions inferable from ontology-url using the Pellet reasoner will be added to the HTML description of the ontology. This parameter implicitly specifies the owlapi parameter. Note that, depending upon the nature of your ontology, this computationally intensive function can be very time-consuming.

lang=XXX

When this optional parameter is specified, the specified language will be used as preferred language instead of English when showing annotations of the ontology specified in ontology-url. E.g.: lang=it, lang=fr, etc.

Some examples

Annotations

LODE takes the most common properties used for denoting annotations, such as dc:title, dc:description, rdfs:label and rdfs:comment. The translation in HTML of annotations made using those properties varies a little depending on whether the annotations describe the ontology itself, or its entities (classes, properties, instances). The following figures illustrates how ontology's annotations are handled by LODE.

visualization of ontology annotations

visualization of pictures

Similarly, the following picture describes how annotations about each entity of the ontology are handled by LODE.

visualization of class annotations

The annotation properties handled by LODE are:

References

Peroni, S., Shotton, D., Vitali, F. (2012). The Live OWL Documentation Environment: a tool for the automatic generation of ontology documentation. To appear in Proceedings of the 18th International Conference on Knowledge Engineering and Knowledge Management (EKAW 2012). Available at http://speroni.web.cs.unibo.it/publications/peroni-2012-live-documentation-environment.pdf

Peroni, S., Shotton, D., Vitali, F. (2013). Tools for the automatic generation of ontology documentation: a task-based evaluation. To appear in International Journal on Semantic Web and Information Systems, 9 (1). Available at http://speroni.web.cs.unibo.it/publications/peroni-2013-tools-automatic-generation.pdf

About the author

Silvio Peroni (Ph.D.) is an Assistant Professor at the Department of Classical Philology and Italian Studies, University of Bologna.

Acknowledgements

The online service is currently hosted by a server kindly provided by the Semantic Technology Laboratory (STLab), Institute of Cognitive Sciences and Technologies, National Research Council, Rome, Italy.